BioinformaticsBMC MicrobiologyPeer-reviewed
BaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies
Kuangyi Wei, Beth Blane, Jacqueline Toussaint…·William Roberts-Sengier
BaGPipe automates bacterial GWAS workflows, improving efficiency and reproducibility by integrating preprocessing, analysis, and visualization in a scalable pipeline.
DOI 10.1186/s12866-026-04909-9