Author

Milad Razavi-Mohseni

Johns Hopkins UniversityORCID 0000-0002-6052-3159Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Organism:mouse· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Ali MortazaviiD· 2 shared Beatrice BorsariiD· 2 shared Fairlie ReeseiD· 2 shared Jill E. MooreiD· 2 shared M BeeriD· 2 shared Mark GersteiniD· 2 shared Mats E. LjungmaniD· 2 shared Michael P. SnyderiD· 2 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Ali MortazaviORCID

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2 papers

Recent·Most cited

An Expanded Registry of Candidate cis-Regulatory Elements for Studying Transcriptional Regulation

Jill E. Moore, Henry Pratt, Kaili Fan, Nishigandha N. Phalke, Jonathan Fisher, Shaimae I. Elhajjajy, Gregory Andrews, Mingshi Gao, Nicole Shedd, Yu Fu, Matthew C Lacadie, Jair Meza, Mohit Ganna, Eva Choudhury, Ross Swofford, , Zhiping Weng

The paper expands the ENCODE Registry of candidate cis-regulatory elements (cCREs) to include 2.35 million human and 927 thousand mouse cCREs, revealing novel regulatory functions and identifying KLF1 as a causal gene for red blood cell traits.

bioRxiv · Dec 26, 2024 · PreprintGenomics

The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity

Fairlie Reese, Brian A. Williams, Gabriela Balderrama-Gutierrez, Dana Wyman, Muhammed Hasan Çelik, Elisabeth Rebboah, Narges Rezaie, Diane E. Trout, Milad Razavi-Mohseni, Yunzhe Jiang, Beatrice Borsari, Samuel Morabito, Heidi Yahan Liang, Cassandra Joan McGill, Sorena Rahmanian, , Ali Mortazavi

Long-read sequencing of 81 human and mouse samples yields 200,000 full-length transcripts plus a triplet framework that separates promoter choice, splicing and 3' end use across tissues.

bioRxiv · May 15, 2023 · PreprintGenomics