Author

Hanbaek Lyu

University of Wisconsin–MadisonORCID 0000-0002-6323-5240Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Organism:Drosophila· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Albert W. ChengiD· 2 shared Chao PaniD· 2 shared Jianhao PengiD· 2 shared Minji KimiD· 2 shared Olgica MilenkovićiD· 2 shared Vishal Rana· 1 shared

Activity by Year

2022-2024 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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2 shared papersGenomics

Albert W. ChengORCID

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2 papers

Recent·Most cited

Interpretable Online Network Dictionary Learning for Inferring Long-Range Chromatin Interactions

Vishal Rana, Jianhao Peng, Chao Pan, Hanbaek Lyu, Albert W. Cheng, Minji Kim, Olgica Milenković

This paper introduces an interpretable online dictionary learning method for analyzing long-range chromatin interactions in Drosophila using ChIA-Drop data.

PLoS Computational Biology · May 16, 2024Peer-reviewedGenomics

Inferring Single-Molecule Chromatin Interactions via Online Convex Network Dictionary Learning

Jianhao Peng, Chao Pan, Hanbaek Lyu, Minji Kim, Albert W. Cheng, Olgica Milenković

The paper introduces an algorithm to infer chromatin interaction patterns from ChIA-Drop data and demonstrates its ability to reconstruct interaction networks and identify functional chromatin elements.

bioRxiv · Jul 28, 2022 · PreprintBioinformatics