Author

Michael J. Passalacqua

Cold Spring Harbor LaboratoryORCID 0000-0002-6344-1175Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Anat HendelmaniD· 2 shared Blaine FitzgeraldiD· 2 shared Gina M. RobitailleiD· 2 shared Hagai ShohatiD· 2 shared Iacopo GentileiD· 2 shared James W. SatterleeiD· 2 shared Jesse A GillisiD· 2 shared Joyce M. Van EckiD· 2 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersPlant Biology

Anat HendelmanORCID

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2 papers

Recent·Most cited

A neofunctionalized flowering antagonist created an evolutionary contingency that channeled Solanaceae adaptation

Hagai Shohat, Danielle Ciren, Andrea Arrones, Iacopo Gentile, Srividya Ramakrishnan, Anat Hendelman, Katharine M. Jenike, Nicole L. Brown, Jose Luna-Ramos, Michael J. Passalacqua, James W. Satterlee, B. P. Fitzgerald, Virginia Baraja-Fonseca, Gina M. Robitaille, Brooke M. Seman, , Zachary B. Lippman

The paper shows a neofunctionalized gene in Solanaceae plants became a flowering antagonist, influencing adaptation across species and environments.

bioRxiv · Feb 21, 2026 · PreprintPlant Biology

Solanum pan-genomics and pan-genetics reveal paralogs as contingencies in crop engineering

Matthias Benoit, Katharine M. Jenike, James W. Satterlee, Srividya Ramakrishnan, Iacopo Gentile, Anat Hendelman, Michael J. Passalacqua, Hamsini Suresh, Hagai Shohat, Gina M. Robitaille, Blaine Fitzgerald, Michael Alonge, Xingang Wang, Ryan Santos, Jia He, , Zachary B. Lippman

The paper uses pan-genomics and genome editing in Solanum to show that paralog diversification hinders genotype-phenotype predictability in crop domestication.

bioRxiv · Sep 10, 2024 · PreprintGenetics