Author

Douglas Buckner Johnson

Vanderbilt UniversityORCID 0000-0002-6390-773XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:deconvolution· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:imaging· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Anne KrogsdamiD· 1 shared Christina PlattneriD· 1 shared Clemens Mayer· 1 shared Dietmar RiederiD· 1 shared Doris WilflingsederiD· 1 shared Francesca FinotelloiD· 1 shared Gerhard Thomas Laschober· 1 shared Hubert HackliD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Anne KrogsdamORCID

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1 paper

Recent·Most cited

BioinformaticsGenome MedicinePeer-reviewedMay 24, 2019

✦ In-depth digest

Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data

Francesca Finotello, Clemens Mayer, Christina Plattner…·Zlatko Trajanoski

quanTIseq estimates absolute fractions of ten immune cell types from bulk RNA-seq; across TCGA, CXCL9/CXCR3 expression, not mutational load, tracks CD8+ T cell infiltration.

1,546 citationstop 1%

humanbulk RNA-seq

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