Author

Clemens Mayer

Innsbruck Medical UniversityPrimary ORCID profile (0000-0002-6495-9873 · 5 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Clemens MayeriD5 papers · University of Groningen

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:deconvolution· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Assay:clinical cohort / trial· 1

Frequent Co-Authors

Dietmar RiederiD· 2 shared Francesca FinotelloiD· 2 shared Hubert HackliD· 2 shared Pornpimol CharoentongiD· 2 shared Zlatko TrajanoskiiD· 2 shared Anne KrogsdamiD· 1 shared Christina PlattneriD· 1 shared Doris WilflingsederiD· 1 shared

Activity by Year

2017-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Dietmar RiederORCID

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2 papers

Recent·Most cited

Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data

Francesca Finotello, Clemens Mayer, Christina Plattner, Gerhard Thomas Laschober, Dietmar Rieder, Hubert Hackl, Anne Krogsdam, Zuzana Loncová, Wilfried Posch, Doris Wilflingseder, Sieghart Sopper, Marieke E. Ijsselsteijn, Thomas P. Brouwer, Douglas Buckner Johnson, Yaomin Xu, , Zlatko Trajanoski

quanTIseq estimates absolute fractions of ten immune cell types from bulk RNA-seq; across TCGA, CXCL9/CXCR3 expression, not mutational load, tracks CD8+ T cell infiltration.

Genome Medicine · May 24, 2019Peer-reviewedBioinformatics✦ In-depth digest

Pan-cancer immunogenomic analyses reveal genotype-immunophenotype relationships and predictors of response to checkpoint blockade

Pornpimol Charoentong, Francesca Finotello, Mihaela Angelova, Clemens Mayer, Mirjana Efremova, Dietmar Rieder, Hubert Hackl, Zlatko Trajanoski

Immunogenomic profiling of 8243 TCGA samples across 20 solid cancers yields an immune atlas and a random-forest-derived immunophenoscore stratifying melanoma responders to checkpoint blockade.

Cell Reports · Jan 1, 2017Peer-reviewedGenomics✦ In-depth digest