Author

Kenta Sato

RIKEN Center for Biosystems Dynamics ResearchORCID 0000-0002-6569-5574Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Kenta Sato2 papers · Karolinska Institutet

Biology Disciplines

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Bioinformatics· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:cell type annotation· 2 Assay:scRNA-seq· 2 Approach:benchmark study· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Organism:yeast· 1

Frequent Co-Authors

Itoshi NikaidoiD· 2 shared Koki TsuyuzakiiD· 2 shared Chiaki Kimura-Ishimaru· 1 shared Hiroyuki HoriuchiiD· 1 shared Hiroyuki SatoiD· 1 shared Katsuro Matsuse· 1 shared Kentaro ShimizuiD· 1 shared Natsuhito Watanabe· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Itoshi NikaidoORCID

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3 papers

Recent·Most cited

Mar1, an HMG-box protein, regulates n-alkane adsorption and cell morphology of the dimorphic yeast Yarrowia lipolytica

Chiaki Kimura-Ishimaru, Simiao Liang, Katsuro Matsuse, Ryo Iwama, Kenta Sato, Natsuhito Watanabe, Satoshi Tezaki, Hiroyuki Horiuchi, Ryouichi Fukuda

This study identifies MAR1, an HMG-box protein, as a regulator of n-alkane adsorption and cell morphology in Yarrowia lipolytica through transcriptional control of relevant genes.

Applied and Environmental Microbiology · Jul 26, 2024Peer-reviewedMicrobiology

Benchmarking principal component analysis for large-scale single-cell RNA-sequencing

Koki Tsuyuzaki, Hiroyuki Sato, Kenta Sato, Itoshi Nikaido

This study benchmarks PCA implementations for large-scale scRNA-seq, finding variations in speed, memory efficiency, and accuracy across algorithms and providing selection guidelines.

Genome biology · Jan 19, 2020Peer-reviewedBioinformatics

CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido

CellFishing.jl efficiently searches large scRNA-seq datasets to find similar cells and identify notable genes with high accuracy and speed.

Genome biology · Feb 11, 2019Peer-reviewedBioinformatics