Author

Hua Ying

Australian National UniversityORCID 0000-0002-6723-2733Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:DNA methylation· 1 Organism:non-human primate· 1 Research Focus:phylogenetics / evolution· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1 Organism:yeast· 1

Frequent Co-Authors

Benjamin D. KaehleriD· 1 shared David G. BourneiD· 1 shared David John MilleriD· 1 shared Gavin A. HuttleyiD· 1 shared Ira CookeiD· 1 shared Jan M. StrugnelliD· 1 shared Jia ZhangiD· 1 shared Madeleine J. H. van OppeniD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Benjamin D. KaehlerORCID

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2 papers

Recent·Most cited

The Inherited Rate Matrix algorithm for phylogenetic model selection for non-stationary Markov processes

Yurong Tang, Benjamin D. Kaehler, Hua Ying, Gavin A. Huttley

This paper introduces the Inherited Rate Matrix (IRM) algorithm for non-stationary phylogenetic model selection, showing improved accuracy and speed over existing methods.

bioRxiv · Dec 6, 2022 · PreprintBioinformatics

Signatures of selection in the coral holobiont reveal complex adaptations to inshore environments driven by Holocene climate change

Ira Cooke, Hua Ying, Sylvain Forêt, Pim Bongaerts, Jan M. Strugnell, Oleg Simakov, Jia Zhang, Matthew A. Field, Mauricio Rodríguez‐Lanetty, Sara C. Bell, David G. Bourne, Madeleine J. H. van Oppen, Mark A. Ragan, David John Miller

The paper identifies genetic adaptations in coral holobionts from the Great Barrier Reef's inshore regions linked to Holocene climate change.

Science Advances · Nov 27, 2020Peer-reviewedGenomics