Author

David Honys

Czech Academy of SciencesORCID 0000-0002-6848-4887Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:cell type annotation· 4 Organism:Arabidopsis· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Assay:proteomics· 2 Research Focus:database / resource· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Božena KlodováiD· 3 shared Jiří RudolfiD· 3 shared Karel RaabeiD· 3 shared Petra Procházková SchrumpfováiD· 3 shared Alžbeta KusováiD· 2 shared Christos MichailidisiD· 2 shared Tereza PřerovskáiD· 2 shared Zahra KahriziiD· 2 shared

Activity by Year

2025-2026 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersPlant Biology

Božena KlodováORCID

Mutual co-authors in cluster

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5 papers

Recent·Most cited

Implementation of Ribo-BiFC method to plant systems using a split mVenus approach

Karel Raabe, Alena Náprstková, Janto Pieters, Elnura Torutaeva, Veronika Jirásková, Zahra Kahrizi, Palash Chandra Mondol, Christos Michailidis, David Honys

The paper implements a Ribo-BiFC method in plant systems using split mVenus to visualize translational rate and study translation dynamics in Arabidopsis thaliana.

Plant Methods · Jan 13, 2026Peer-reviewedPlant Biology

HSP90-mediated stress resilience in male gametophyte of Arabidopsis thaliana

Zahra Kahrizi, Christos Michailidis, Karel Raabe, Jan Fíla, Božena Klodová, Lenka Steinbachová, Jiří Rudolf, Petra Procházková Schrumpfová, David Honys, Sotirios Fragkostefanakis

The paper investigates HSP90-mediated stress resilience in Arabidopsis thaliana male gametophyte stages, showing stage-specific heat stress responses and defects in late-stage development under heat stress.

Plant Stress · Oct 30, 2025Peer-reviewedPlant Biology

Molecular and Phenotypic Characterization of Telomere Repeat Binding (TRBs) Proteins in Moss: Evolutionary and Functional Perspectives

Alžbeta Kusová, Marcela Holá, Ivana Goffová Petrová, Jiří Rudolf, Dagmar Zachová, Jan Skalák, Jan Hejátko, Božena Klodová, Tereza Přerovská, Martin Lyčka, Eva Sýkorová, Yann Bertrand, Jiřı́ Fajkus, David Honys, Petra Procházková Schrumpfová

This study characterizes TRB proteins in moss to explore their evolutionary conservation and functional roles in telomere maintenance and plant development.

bioRxiv · Jun 11, 2025 · PreprintPlant Biology

GOLEM: A tool for visualizing the distribution of Gene regulatOry eLEMents within the plant promoters with a focus on male gametophyte

Lukáš Nevosád, Božena Klodová, Jiří Rudolf, Tomáš Raček, Tereza Přerovská, Alžbeta Kusová, Radka Svobodová Vařeková, David Honys, Petra Procházková Schrumpfová

GOLEM visualizes the distribution of cis-regulatory elements in plant promoters, focusing on male gametophyte-related motifs across multiple plant species.

The Plant Journal · Mar 1, 2025Peer-reviewedBioinformatics

Arabidopsis seed stored mRNAs and translation regulation during post-harvest ripening and imbibition.

Jana Balarynová, Barbora Klčová, Radim Čegan, Karel Raabe, Petra Krejčí, Petr Bednář, David Potěšil, Václav Pustka, Danuše Tarkowská, Veronika Turečková, Zbyněk Zdráhal, David Honys, Petr Smýkal

This study compares translational regulation in two Arabidopsis accessions during seed germination, identifying differences in mRNA abundance, RNA modifications, and protein expression.

bioRxiv · Jan 30, 2025 · PreprintPlant Biology