Author

David G. Garmire

University of Hawaiʻi at MānoaORCID 0000-0002-6913-6550Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Assay:scRNA-seq· 2 Research Focus:software / tool· 2

Frequent Co-Authors

Cédric G ArisdakessianiD· 2 shared Lana Xia GarmireiD· 2 shared Thomas WolfgruberiD· 2 shared Xun ZhuiD· 2 shared Aravind MantravadiiD· 1 shared Austin Tasato· 1 shared Breck YunitsiD· 1 shared Olivier PoirioniD· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Cédric G ArisdakessianORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GranatumX: A community engaging, modularized and flexible webtool for single-cell analysis

David G. Garmire, Xun Zhu, Aravind Mantravadi, Qianhui Huang, Breck Yunits, Yu Liu, Thomas Wolfgruber, Olivier Poirion, Tianying Zhao, Cédric G Arisdakessian, Stefan Stanojevic, Lana Xia Garmire

GranatumX provides a web-based platform for single-cell RNA sequencing analysis, enabling biologists to use bioinformatics tools through a graphical interface and allowing developers to integrate their own tools into customizable pipelines.

Genomics Proteomics & Bioinformatics · Jun 1, 2021Peer-reviewedBioinformatics

Granatum: a graphical single-cell RNA-Seq analysis pipeline for genomics scientists

Xun Zhu, Thomas Wolfgruber, Austin Tasato, Cédric G Arisdakessian, David G. Garmire, Lana Xia Garmire

Granatum provides a web-based, graphical pipeline for scRNA-Seq analysis, enabling non-programmers to perform various analysis steps without coding.

Genome Medicine · Dec 1, 2017Peer-reviewedBioinformatics