Author

Thomas Wolfgruber

University of Hawaiʻi at MānoaORCID 0000-0001-8770-1800Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:scRNA-seq· 2 Research Focus:software / tool· 2 Research Focus:genome assembly· 1 Assay:whole-genome sequencing· 1 Organism:zebrafish· 1

Frequent Co-Authors

Cédric G ArisdakessianiD· 2 shared David G. GarmireiD· 2 shared Lana Xia GarmireiD· 2 shared Xun ZhuiD· 2 shared Alex R. HastieiD· 1 shared Andrew J. OlsoniD· 1 shared Aravind MantravadiiD· 1 shared Austin Tasato· 1 shared

Activity by Year

2017-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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2 shared papersBioinformatics

Cédric G ArisdakessianORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

BioinformaticsGenomics Proteomics & BioinformaticsPeer-reviewedJun 1, 2021

GranatumX: A community engaging, modularized and flexible webtool for single-cell analysis

David G. Garmire, Xun Zhu, Aravind Mantravadi…·Lana Xia Garmire

GranatumX provides a web-based platform for single-cell RNA sequencing analysis, enabling biologists to use bioinformatics tools through a graphical interface and allowing developers to integrate their own tools into customizable pipelines.

11 citations

scRNA-seqexperimental assay

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BioinformaticsGenome MedicinePeer-reviewedDec 1, 2017

Granatum: a graphical single-cell RNA-Seq analysis pipeline for genomics scientists

Xun Zhu, Thomas Wolfgruber, Austin Tasato…·Lana Xia Garmire

Granatum provides a web-based, graphical pipeline for scRNA-Seq analysis, enabling non-programmers to perform various analysis steps without coding.

79 citationstop 3%

scRNA-seqexperimental assay

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GenomicsNaturePeer-reviewedJun 1, 2017

Improved maize reference genome with single molecule technologies

Yinping Jiao, Paul S. Peluso, Jinghua Shi…·Doreen Ware

The paper improves the maize reference genome using single molecule technologies, resulting in longer contigs and better annotation of repetitive elements and genes.

1,229 citationstop 1%

zebrafishwhole-genome sequencing

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