Author

Neha Shukla

Central European Institute of Technology – Masaryk UniversityORCID 0000-0002-7175-8308Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Plant Biology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 3 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:chromatin & epigenetic regulation· 2 Assay:proteomics· 2 Assay:bulk RNA-seq· 1 Research Focus:transcription & RNA processing· 1

Frequent Co-Authors

Karel ŘíhaiD· 3 shared Albert CairóiD· 2 shared Anna VargovaiD· 2 shared Pavlina MikulkováiD· 2 shared Cláudio CapitãoiD· 1 shared David PotěšiliD· 1 shared Jakub Brolik· 1 shared Jan HejátkoiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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3 shared papersPlant Biology

Karel ŘíhaORCID

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3 papers

Recent·Most cited

Genome-wide mapping of DCP2-dependent 5' cap footprints in Arabidopsis thaliana

Neha Shukla, Michael A. Schon, Vivek K. Raxwal, Michael D. Nodine, Karel Říha

This study maps DCP2-dependent 5' cap footprints in Arabidopsis thaliana using in vitro decapping and transcriptome sequencing, revealing 13,000 capped transcripts and their role in RNA stability and decay pathways.

NAR Genomics and Bioinformatics · Jun 27, 2026Peer-reviewedPlant Biology

SMG7 and eIF4A constitute a homeostatic module controlling P-body condensation and function of Meiotic bodies

Albert Cairó, Neha Shukla, Sofia Kanavorova, Jan Skalák, Pavlina Mikulková, Anna Vargova, David Potěšil, Zbyněk Zdráhal, Jan Hejátko, Karel Říha

The paper identifies SMG7 and eIF4A as a regulatory module that controls P-body condensation and function of meiotic bodies in Arabidopsis.

Nature Communications · Apr 21, 2026Peer-reviewedCell Biology

Post-transcriptional regulation of meiotic transcripts by the RNA binding protein CDM1 is associated with cytoplasmic condensate assemblies

Surendra Saddala, Neha Shukla, Jaroslav Fulneček, Albert Cairó, Jakub Brolik, Pavlina Mikulková, Jana Pecinkova, Anna Vargova, Sona Bukovcakova Valuchova, Cláudio Capitão, Terezie M. Mandáková, Karel Říha

This study identifies CDM1 as an RNA-binding protein that regulates meiotic gene expression through cytoplasmic condensate assemblies in Arabidopsis.

bioRxiv · Aug 17, 2025 · PreprintPlant Biology