Author

Anshul Budhraja

CHU Sainte-Justine Research CenterORCID 0000-0002-7176-2980Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

Animesh RayiD· 1 shared Anjan TrikhaiD· 1 shared Anubhav Basu· 1 shared Arulselvi SubramanianiD· 1 shared Aruna NambirajaniD· 1 shared Atish GhewareiD· 1 shared Bastien Paré· 1 shared Chitra SarkariD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMolecular Biology

Animesh RayORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Assembly Arena: Benchmarking RNA isoform reconstruction algorithms for nanopore sequencing

Mélanie Sagniez, Anshul Budhraja, Bastien Paré, Shawn M. Simpson, Clément Vinet-Ouellette, Marieke J. Rozendaal, Martin A. Smith

The paper benchmarks RNA isoform reconstruction algorithms using nanopore sequencing data to evaluate their accuracy in transcriptome assembly.

bioRxiv · Mar 21, 2024 · PreprintBioinformatics

Molecular signature of postmortem lung tissue from COVID-19 patients suggests distinct trajectories driving mortality

Anshul Budhraja, Anubhav Basu, Atish Gheware, Dasari Abhilash, Seesandra V. Rajagopala, Suman Pakala, Madhuresh Sumit, Animesh Ray, Arulselvi Subramanian, Purva Mathur, Aruna Nambirajan, Sachin Kumar, Ritu Gupta, Naveet Wig, Anjan Trikha, , Deepali Jain

This study identifies two distinct molecular signatures in postmortem lung tissue from severe COVID-19 patients, associated with different pathological mechanisms and microbiome profiles.

Disease Models & Mechanisms · Apr 19, 2022Peer-reviewedMolecular Biology