Author

Fuki Gyoja

Konan UniversityORCID 0000-0002-7187-7163Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Evolutionary Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:C. elegans· 2 Organism:mouse· 2 Approach:statistical model· 2 Organism:zebrafish· 2 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1

Frequent Co-Authors

Takehiro G. KusakabeiD· 3 shared Kenta NakaiiD· 2 shared Ayana Maruo· 1 shared Hideyo OhuchiiD· 1 shared Kazumi SakaiiD· 1 shared Keita SatoiD· 1 shared Ken-ichi MizutaniiD· 1 shared Martin LozaiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Takehiro G. KusakabeORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GenomicsbioRxivPreprintApr 15, 2026

Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function

Xin Zeng, Fuki Gyoja, Ayana Maruo…·Takehiro G. Kusakabe

This study generates the first spatial transcriptomic atlas of the adult Ciona neural complex, revealing molecular zonation and functional roles of key regions like the neural gland.

DOI 10.64898/2026.04.13.718160

C. elegansspatial transcriptomics

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintSep 17, 2025

How opsins diversified after the teleost whole-genome duplication: Insights from two parietopsins of the red piranha, Pygocentrus nattereri

Keita Sato, Takahiro Yamashita, Kazumi Sakai…·Fuki Gyoja

The paper examines opsin diversification after the teleost whole-genome duplication by analyzing parietopsin paralogs in red piranha and other species, finding slight spectral differences and co-expression patterns.

DOI 10.1101/2025.09.17.675483

zebrafishmouse

𝕏 PostBluesky

BioinformaticsNAR Genomics and BioinformaticsPeer-reviewedSep 28, 2024

Comparative single-cell transcriptomic analysis reveals putative differentiation drivers and potential origin of vertebrate retina

Xin Wu Zeng, Fuki Gyoja, Yang Cui…·Kenta Nakai

The paper compares single-cell transcriptomes across four vertebrate species to identify conserved regulatory patterns and differentiation drivers in retinal cells.

5 citations

mousezebrafish

𝕏 PostBluesky