Author

Sophie Martine Prud’homme

Centre National de la Recherche ScientifiqueORCID 0000-0002-7199-1839Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Approach:statistical model· 1 Organism:zebrafish· 1

Frequent Co-Authors

Élise BilloiriD· 2 shared Ellis FrankliniD· 2 shared Jérémie OhanessianiD· 2 shared Catherine Lorgeoux· 1 shared Géraldine Kitzinger· 1 shared Marie Laure Delignette‐MulleriD· 1 shared Philippe VeberiD· 1 shared Vincent FelteniD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 22 mutual co-author links

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Focal author (center)Selected co-authorORCID co-authorUnlinked name

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2 shared papersPhysiology

Élise BilloirORCID

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2 papers

Recent·Most cited

Effects of dibutyl phthalate (DBP) on life history traits and population dynamics of Daphnia magna: comparison of two exposure regimes

Jérémie Ohanessian, Sophie Martine Prud’homme, Ellis Franklin, Géraldine Kitzinger, Catherine Lorgeoux, Élise Billoir, Vincent Felten

This study examines the effects of dibutyl phthalate (DBP) on Daphnia magna life history traits under two exposure regimes, finding that early embryonic exposure leads to significant impacts on survival, growth, and reproduction at low concentrations.

Peer Community Journal · Aug 20, 2025Peer-reviewedPhysiology

Cluefish: mining the dark matter of transcriptional data series with over-representation analysis enhanced by aggregated biological prior knowledge

Ellis Franklin, Élise Billoir, Philippe Veber, Jérémie Ohanessian, Marie Laure Delignette‐Muller, Sophie Martine Prud’homme

Cluefish identifies gene clusters and biological functions in transcriptomic data series using over-representation analysis and prior knowledge, revealing retinoid signaling disruption as a sensitive pathway in zebrafish exposed to dibutyl phthalate.

NAR Genomics and Bioinformatics · Jul 4, 2025Peer-reviewedBioinformatics