Author

Paolo Macchi

University of TrentoORCID 0000-0002-7245-9019Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Organism:human· 1 Organism:mouse· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Alessandro PilliiD· 1 shared Christian RamireziD· 1 shared Emma BusarelloiD· 1 shared Fabio LauriaiD· 1 shared Federica RessiD· 1 shared Gabriele TomèiD· 1 shared Gabriella VieroiD· 1 shared Giorgia BucciarelliiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alessandro PilliORCID

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1 paper

Recent·Most cited

Cell Marker Accordion: interpretable single-cell and spatial omics annotation in health and disease

Emma Busarello, Giulia Biancon, Ilaria Cimignolo, Fabio Lauria, Zuhairia Ibnat, Christian Ramirez, Gabriele Tomè, Marianna Ciuffreda, Giorgia Bucciarelli, Alessandro Pilli, Stefano Maria Marino, Vittorio Bontempi, Federica Ress, Kristin Roseth Aass, Jennifer VanOudenhove, , Toma Tebaldi

The paper introduces Cell Marker Accordion, a tool for accurate and interpretable single-cell and spatial omics annotation across health and disease contexts.

Nature Communications · Jul 7, 2025Peer-reviewedBioinformatics