Author

Claire Bomkamp

University of British ColumbiaORCID 0000-0002-7259-5248Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Paul PavlidisiD· 2 shared Shreejoy J. TripathyiD· 2 shared Ann Marie CraigiD· 1 shared Burak Ogan MancarciiD· 1 shared Carolina Bengtsson GonzalesiD· 1 shared Jens Hjerling‐LeffleriD· 1 shared Lilah TokeriD· 1 shared Manuel BelmadaniiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 19 mutual co-author links

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2 shared papersNeuroscience

Paul PavlidisORCID

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2 papers

Recent·Most cited

Transcriptomic correlates of electrophysiological and morphological diversity within and across neuron types

Claire Bomkamp, Shreejoy J. Tripathy, Carolina Bengtsson Gonzales, Jens Hjerling‐Leffler, Ann Marie Craig, Paul Pavlidis

The paper identifies gene expression correlations with electrophysiological and morphological traits across neuron types, distinguishing class-driven from within-class relationships.

PLoS Computational Biology · Jun 18, 2019Peer-reviewedNeuroscience

A critical assessment of single-cell transcriptomes sampled following patch-clamp electrophysiology

Shreejoy J. Tripathy, Lilah Toker, Claire Bomkamp, Burak Ogan Mancarci, Manuel Belmadani, Paul Pavlidis

This study assesses patch-seq, showing technical artifacts in single-cell transcriptomes and proposing a marker gene-based approach to improve gene expression-electrophysiological feature alignment.

bioRxiv · Jun 12, 2018 · PreprintNeuroscience