Author

Kari G. Rabe

Mayo ClinicORCID 0000-0002-7313-1875Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genetic & Genomic Medicine· 2 Genetics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 3 Research Focus:GWAS / association mapping· 2 Approach:statistical model· 2 Approach:Bayesian inference· 1 Assay:bulk RNA-seq· 1 Research Focus:deconvolution· 1 Assay:GWAS summary statistics· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Alison P. KleiniD· 2 shared Harvey A. RischiD· 2 shared Mengmeng DuiD· 2 shared Michael GogginsiD· 2 shared Paige M. BracciiD· 2 shared Paul BrennaniD· 2 shared Rachel Ε. NealeiD· 2 shared Rayjean J. HungiD· 2 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenetic & Genomic Medicine

Alison P. KleinORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Novel Genetic Risk Loci for Pancreatic Ductal Adenocarcinoma Identified in a Genome-wide Study of African Ancestry Individuals

Candelaria Vergara, Zhanmo Ni, Jun Zhong, David F. McKean, Katelyn E. Connelly, Samuel O. Antwi, Alan A. Arslan, Paige M. Bracci, Mengmeng Du, Steve Gallinger, Jeanine M. Genkinger, Christopher A. Haiman, Manal Hassan, Rayjean J. Hung, Chad Huff, , Alison P. Klein

This study identifies novel genetic risk loci for pancreatic ductal adenocarcinoma in African ancestry individuals through admixture mapping and GWAS.

medRxiv · Apr 22, 2026 · PreprintGenetic & Genomic Medicine

Variation in bulk RNA-seq and estimated cell type proportion using deconvolution when comparing pancreatic cancer samples within the same individual

Rick J. Jansen, Sarah A. Munro, Samuel O. Antwi, Kari G. Rabe, Hugues Sicotte

The paper compares bulk RNA-seq and deconvolution results from paired pancreatic cancer samples in the same patients, finding variability in cell type proportions but no significant gene expression differences.

medRxiv · May 5, 2025 · PreprintGenetic & Genomic Medicine

Bayesian copy number detection and association in large-scale studies

Stephen Cristiano, David M. McKean, Jacob Carey, Paige M. Bracci, Paul Brennan, Michael Chou, Mengmeng Du, Steve Gallinger, Michael Goggins, Manal M. Hassan, Rayjean J. Hung, Robert C. Kurtz, Donghui Li, Lingeng Lu, Rachel Ε. Neale, , Robert B. Scharpf

This paper develops a Bayesian method to detect copy number variants and assess their association with disease in large-scale studies, finding deletions near MYC and TUSC3 linked to pancreatic cancer.

BMC Cancer · Sep 7, 2020Peer-reviewedGenetics