Author

Jianfeng Cao

City University of Hong KongORCID 0000-0002-7323-8875Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Assay:imaging· 3 Organism:C. elegans· 2 Research Focus:cell-cell communication· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Chao TangiD· 2 shared Guoye GuaniD· 2 shared Hong YaniD· 2 shared Lu-yan Chan· 2 shared Ming‐Kin WongiD· 2 shared Zhongying ZhaoiD· 2 shared Bin DuaniD· 1 shared Dawen CaiiD· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersDevelopmental Biology

Chao TangORCID

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3 papers

Recent·Most cited

Quantitative cell morphology in C. elegans embryos reveals regulations of cell volume asymmetry

Guoye Guan, Zelin Li, Yiming Ma, Jianfeng Cao, Ming‐Kin Wong, Lu-yan Chan, Hong Yan, Chao Tang, Zhongying Zhao

The paper quantifies cell morphology in C. elegans embryos, revealing that signaling pathways regulate both cell fate asymmetry and volume asymmetry.

bioRxiv · Nov 20, 2023 · PreprintDevelopmental Biology

Cell Instance Segmentation via Multi-Scale Non-local Correlation

Bin Duan, Jianfeng Cao, Wei Wang, Dawen Cai, Yan Yan

This paper introduces a method using non-local correlation in the embedding space to improve cell instance segmentation in EM images, reducing over- and under-segmentation issues.

IEEE International Symposium on Biomedical Imaging (ISBI) · Apr 18, 2023Peer-reviewedBioinformatics

Establishment of morphological atlas of Caenorhabditis elegans embryo with cellular resolution using deep-learning-based 4D segmentation

Jianfeng Cao, Guoye Guan, Vincy Wing Sze Ho, Ming‐Kin Wong, Lu-Yan Chan, Chao Tang, Zhongying Zhao, Hong Yan

The paper develops CShaper, a deep-learning-based pipeline to generate a 4D morphological atlas of C. elegans embryos, characterizing cell shape, migration, and cell-cell contacts across development.

Nature Communications · Dec 7, 2020Peer-reviewedDevelopmental Biology