Yan Yan

A browser-based platform for storage, visualization, and analysis of large-scale 3D images in HPC environments

The paper develops a platform for storing, visualizing, and analyzing large-scale 3D images in HPC environments using a scalable storage format and web-based annotation tools.

Artifact-Minimized High-Ratio Image Compression with Preserved Analysis Fidelity

This paper develops a compression method that achieves high compression ratios with minimal visual and quantitative errors for single-molecule imaging data.

Cell Instance Segmentation via Multi-Scale Non-local Correlation

This paper introduces a method using non-local correlation in the embedding space to improve cell instance segmentation in EM images, reducing over- and under-segmentation issues.

Unsupervised Neural Tracing in Densely Labeled Multispectral Brainbow Images

This paper introduces an unsupervised method for tracing neurons in multispectral Brainbow images, achieving more accurate results than existing methods by reducing segmentation and continuity errors.

A Recurrent Neural Network Approach for Automated Neural Tracing in Multispectral 3D Images

The paper proposes a recurrent neural network for automated neural tracing in multispectral 3D Brainbow images, showing good performance on mouse brain data.