Author

Eric Alcaide

Universitat de BarcelonaORCID 0000-0002-7367-0369Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Research Focus:benchmarking· 1 Approach:diffusion model· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Amalio TelentiiD· 1 shared E WeinaniD· 1 shared Guolin KeiD· 1 shared Huaqing HuangiD· 1 shared Jiahao FaniD· 1 shared M. Cyrus MaheriD· 1 shared Stella BidermaniD· 1 shared Ziyao LiiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 13 mutual co-author links

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1 shared paperMolecular Biology

Amalio TelentiORCID

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2 papers

Recent·Most cited

Accurate Conformation Sampling via Protein Structural Diffusion

Jiahao Fan, Ziyao Li, Eric Alcaide, Guolin Ke, Huaqing Huang, E Weinan

UFConf improves protein conformation sampling using a diffusion model based on amino acid sequences, outperforming existing methods and showing utility in drug discovery.

Journal of Chemical Information and Modeling · Sep 28, 2024Peer-reviewedBioinformatics

MP-NeRF: A Massively Parallel Method for Accelerating Protein Structure Reconstruction from Internal Coordinates

Eric Alcaide, Stella Biderman, Amalio Telenti, M. Cyrus Maher

This paper introduces a massively parallel NeRF implementation for accelerating protein structure reconstruction from internal coordinates, achieving speedups of 400-1200x over previous methods.

Journal of Computational Chemistry · Oct 28, 2021Peer-reviewedMolecular Biology