Author

Stella Biderman

Booz Allen Hamilton (United States)ORCID 0000-0001-8228-1042Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Research Focus:protein structure prediction· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Adegoke A. OjewoleiD· 1 shared Amalio TelentiiD· 1 shared Andrew M. WatkinsiD· 1 shared Arkadiusz NowaczynskiiD· 1 shared Bei WangiD· 1 shared Bo ZhangiD· 1 shared Brian D. WeitzneriD· 1 shared Christina FloristeaniD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

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10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Adegoke A. OjewoleORCID

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2 papers

Recent·Most cited

BioinformaticsNature MethodsPeer-reviewedMay 14, 2024

OpenFold: Retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization

Gustaf Ahdritz, Nazim Bouatta, Christina Floristean…·Mohammed AlQuraishi

The paper trains a new version of AlphaFold2, OpenFold, and evaluates its generalization ability and learning mechanisms.

439 citationstop 1%

protein structurestatistical model

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Molecular BiologyJournal of Computational ChemistryPeer-reviewedOct 28, 2021

MP-NeRF: A Massively Parallel Method for Accelerating Protein Structure Reconstruction from Internal Coordinates

Eric Alcaide, Stella Biderman, Amalio Telenti, M. Cyrus Maher

This paper introduces a massively parallel NeRF implementation for accelerating protein structure reconstruction from internal coordinates, achieving speedups of 400-1200x over previous methods.

7 citations

protein structureexperimental assay

𝕏 PostBluesky