Author

Satoshi Fujimoto

Kyushu UniversityORCID 0000-0002-7618-5502Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Organism:mouse· 4 Assay:imaging· 3 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:synaptic & neural circuits· 1

Frequent Co-Authors

Takeshi ImaiiD· 5 shared Richi SakaguchiiD· 3 shared Biswanath SahaiD· 2 shared Daichi MoriyasuiD· 2 shared Hikari Takeshima· 2 shared Marcus N. LeiweiD· 2 shared Shigenori InagakiiD· 2 shared Shuhei Aihara· 2 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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5 shared papersNeuroscience

Takeshi ImaiORCID

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5 papers

Recent·Most cited

Multiplexed mapping of long-range projections with FluoCode, a combinatorial fluorescent barcoding system

Daichi Moriyasu, Akiya Watakabe, Itaru Imayoshi, Satoshi Fujimoto, Biswanath Saha, Yuki Ishida, Hikari Takeshima, Mizuki Sakamoto, Henrik Skibbe, Junichi Hata, Hinako Oshiro, Hideyuki Okano, Takeshi Imai

The paper introduces FluoCode, a fluorescent barcoding system for multiplexed projection mapping in mice and marmosets, revealing fine-scale topographic maps in subcortical regions.

bioRxiv · Nov 10, 2026 · PreprintNeuroscience

Isotonic and minimally invasive optical clearing media for live cell imaging ex vivo and in vivo

Shigenori Inagaki, Nao Nakagawa-Tamagawa, Nathan Huynh, Yuki Kambe, Rei Yagasaki, Satoshi Manita, Satoshi Fujimoto, Takahiro Noda, Misato Mori, Aki Teranishi, Hikari Takeshima, Koki Ishikawa, Yuki Naitou, Tatsushi Yokoyama, Masayuki Sakamoto, , Takeshi Imai

This paper develops a minimally invasive optical clearing medium for live mammalian tissue imaging, enabling structural and functional imaging with minimal impact on cellular properties.

Nature Methods · Mar 12, 2026Peer-reviewedNeuroscience

Automated neuronal reconstruction with super-multicolour fluorescence imaging

Marcus N. Leiwe, Satoshi Fujimoto, Toshikazu Baba, Daichi Moriyasu, Biswanath Saha, Richi Sakaguchi, Shigenori Inagaki, Takeshi Imai

This paper introduces a method for automated neuronal circuit reconstruction using super-multicolour fluorescence imaging and an unsupervised clustering algorithm.

Nature Communications · Jun 25, 2024Peer-reviewedNeuroscience

Activity-dependent lateral inhibition signals for synaptic competition

Satoshi Fujimoto, Marcus N. Leiwe, Shuhei Aihara, Richi Sakaguchi, Yuko Muroyama, Reiko Kobayakawa, Ko Kobayakawa, Tetsuichiro Saito, Takeshi Imai

The paper shows how activity-dependent lateral inhibition through NMDAR-RhoA signals determines synaptic competition and pruning in the olfactory bulb and barrel cortex.

Developmental Cell · Jun 7, 2023Peer-reviewedNeuroscience

BMPR-2 gates activity-dependent stabilization of dendrites during mitral cell remodeling

Shuhei Aihara, Satoshi Fujimoto, Richi Sakaguchi, Takeshi Imai

This study identifies BMPR-2 as a key regulator of dendrite stabilization in mitral cells through interactions with LIMK and neuronal activity.

Cell Reports · Jun 1, 2021Peer-reviewedNeuroscience