Arnab Bhattacherjee

This paper introduces a latent interaction landscape from Micro-C data that captures chromatin regulatory identity and structural diversity beyond contact frequency.

This study introduces a polymer physics-based model integrating contact data and nucleosome positioning to reveal structural differences between active and inactive chromatin states in human genomic loci.

VECTOR quantifies chromatin structure from Hi-C data using Von Neumann entropy and graph spectral theory, outperforming existing tools in detecting structural changes across biological conditions.

This paper uses computational models to study how phosphorylation at Ser608 and Ser612 affects pRbAB's interaction with E2FTA, revealing changes in electrostatic properties and conformation.