Author

Yasamin Salimi

University of BonnORCID 0000-0002-7773-7786Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:electronic health records· 1

Frequent Co-Authors

Martin Hofmann‐ApitiusiD· 2 shared the Alzheimer’s Disease Neuroimaging Initiative· 2 shared the Alzheimer’s Disease Repository Without Borders Investigators· 2 shared the Japanese Alzheimer’s Disease Neuroimaging Initiative· 2 shared Colin J. BirkenbihliD· 1 shared Daniel Domingo‐FernándéziD· 1 shared Helena BalabiniD· 1 shared John GallacheriD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Martin Hofmann‐ApitiusORCID

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2 papers

Recent·Most cited

Semantic harmonization of Alzheimer's disease datasets using AD-Mapper

Philipp Wegner, Helena Balabin, Mehmet Can Ay, Sarah Bauermeister, Lewis O. J. Killin, John Gallacher, Martin Hofmann‐Apitius, Yasamin Salimi, the Alzheimer’s Disease Neuroimaging Initiative, the Japanese Alzheimer’s Disease Neuroimaging Initiative, the Aging Brain: Vasculature, Ischemia, and Behavior Study, the Alzheimer’s Disease Repository Without Borders Investigators

This paper introduces AD-Mapper, a tool for semantic harmonization of Alzheimer's disease datasets, which outperforms a string-matching baseline.

Journal of Alzheimer s Disease · May 15, 2024Peer-reviewedBioinformatics

Exploring the intricacies and pitfalls of the ATN framework: An assessment across cohorts and thresholding methodologies

Yasamin Salimi, Daniel Domingo‐Fernándéz, Martin Hofmann‐Apitius, Colin J. Birkenbihl, the Alzheimer’s Disease Neuroimaging Initiative, the Japanese Alzheimer’s Disease Neuroimaging Initiative, the Alzheimer’s Disease Repository Without Borders Investigators

This paper evaluates how different thresholding methods affect ATN profiles across AD cohorts, finding high variability and limited generalizability of results.

bioRxiv · Dec 6, 2022 · PreprintBioinformatics