Author

Wendy Tran

University of California, Los AngelesORCID 0000-0002-7851-4859Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:biophysical modeling· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1

Frequent Co-Authors

Donghui Cheng· 2 shared Owen N. WitteiD· 2 shared Alessia DavidiD· 1 shared Alex LeeiD· 1 shared Ameya S. ChamphekariD· 1 shared Antoni RibasiD· 1 shared Beatrice D. ZhangiD· 1 shared Chia‐Chun CheniD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersCancer Biology

Donghui Cheng

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3 papers

Recent·Most cited

GeneticsbioRxivPreprintJul 22, 2025

Missense3D-PTMdb an interactive web resource to explore and visualize genetic variants and post-translational modifications sites (PTMs) using AlphaFold 3D models

Haotian Zhao, Ryan Pye, Gemma Walker…·Alessia David

Missense3D-PTMdb maps missense variants and PTM sites to AlphaFold 3D models to explore their structural and functional impacts.

1 citation

humanprotein structure

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Cancer BiologyProceedings of the National Academy of SciencesPeer-reviewedNov 26, 2024

PGC-1a drives small cell neuroendocrine cancer progression towards an ASCL1-expressing subtype with increased mitochondrial capacity

Grigor Varuzhanyan, Chia‐Chun Chen, Jack Freeland…·Owen N. Witte

21 citations

humanbulk RNA-seq

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BioinformaticsProceedings of the National Academy of SciencesPeer-reviewedMay 16, 2023

IRIS: Big data-informed discovery of cancer immunotherapy targets arising from pre-mRNA alternative splicing

Yang Pan, John W. Phillips, Beatrice D. Zhang…·Yi Xing

IRIS identifies cancer immunotherapy targets from alternative splicing using transcriptomics data and validates them with patient T cells.

51 citationstop 2%

humanbulk RNA-seq

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