Author

Shalin S. Patel

Brown UniversityORCID 0000-0002-7934-7095Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Approach:graph neural network· 1 Organism:human· 1

Frequent Co-Authors

AM Carter· 1 shared Aparna ShekariD· 1 shared Aurelio GalliiD· 1 shared Daniele ZanellaiD· 1 shared David P. Saleeby· 1 shared Erica LarschaniD· 1 shared Heinrich J. G. MatthiesiD· 1 shared İvet BahariD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperNeuroscience

AM Carter

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Author profile →

2 papers

Recent·Most cited

Syntaxin1 Ser14 Phosphorylation is Required for Non-Vesicular Dopamine Release

Aparna Shekar, Samuel J. Mabry, Mary Hongying Cheng, Jenny I. Aguilar, Shalin S. Patel, Daniele Zanella, David P. Saleeby, Yanqi Zhu, Tiziana Romanazzi, Paula G. Ulery, İvet Bahar, AM Carter, Heinrich J. G. Matthies, Aurelio Galli

This paper shows that phosphorylation of Syntaxin1 at Ser14 is critical for non-vesicular dopamine release and AMPH-induced behaviors in Drosophila.

Science Advances · Jan 11, 2023Peer-reviewedNeuroscience

Integrating long-range regulatory interactions to predict gene expression using graph convolutional networks

Jeremy Bigness, Xavier Loinaz, Shalin S. Patel, Erica Larschan, Ritambhara Singh

The paper introduces GC-MERGE, a graph convolutional model that integrates spatial genomic organization and histone modifications to predict gene expression and interpret regulatory factors.

Journal of Computational Biology · Mar 24, 2022Peer-reviewedBioinformatics