Author

Lane Sawyer

Allen Institute for Brain ScienceORCID 0000-0002-7955-0130Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:mouse· 2 Assay:scRNA-seq· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Carol L. ThompsoniD· 2 shared Changkyu LeeiD· 2 shared Elysha FiabaneiD· 2 shared Jack WatersiD· 2 shared Lydia NgiD· 2 shared Michael HawrylycziD· 2 shared Noah Shepard· 2 shared Scott F. DanieliD· 2 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Carol L. ThompsonORCID

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2 papers

Recent·Most cited

MapMyCells: High-performance mapping of unlabeled cell-by-gene data to reference brain taxonomies

Scott F. Daniel, Changkyu Lee, Tyler S. Mollenkopf, M. H. Lee, Joel Arbuckle, Elysha Fiabane, Mariano I. Gabitto, Nelson Johansen, Inkar Kapen, Andrew W. Kraft, Jane Lai, Su Ying Li, Ryan McGinty, Jeremy A. Miller, Skyler Moosman, , Michael Hawrylycz

MapMyCells maps unlabeled single-cell datasets to reference brain taxonomies, enabling cross-study integration and reproducible cell-type annotation.

bioRxiv · Mar 9, 2026 · PreprintBioinformatics

A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain

Zizhen Yao, Cindy T. J. van Velthoven, Michael Kunst, Meng Zhang, Delissa McMillen, Changkyu Lee, Won Jung, Jeff Goldy, Aliya Abdelhak, Matthew Aitken, Katherine S. Baker, Pamela M. Baker, Eliza R. Barkan, Darren Bertagnolli, Ashwin A. Bhandiwad, , Xiaowei Zhuang

This paper creates a high-resolution transcriptomic and spatial cell type atlas of the whole adult mouse brain, revealing spatial organization and transcription factor codes for cell types.

Nature · Dec 13, 2023Peer-reviewedNeuroscience