Uriel Urquiza‐García

Gearing up Golden Braid assembly for plant synthetic genomics with RepTiles

The paper introduces RepTiles, a system for generating random DNA segments for synthetic genomics, enabling the construction of ultra-long synthetic DNA in Physcomitrium patens.

Abundant clock proteins point to missing molecular regulation in the plant circadian clock

The paper refactors plant circadian clock models to absolute units, predicts high clock protein levels in Arabidopsis, and identifies discrepancies in DNA-binding constants.

Testing the inferred transcription rates of a dynamic, gene network model in absolute units

The paper validates a gene network model of the plant circadian clock by incorporating absolute transcription rates and testing against experimental data.

Expanding the bioluminescence reporter toolkit for plant chronobiology with NanoLUC

This paper demonstrates that NanoLUC is a viable alternative to firefly luciferase for studying protein dynamics in plants, particularly for long-term and stable measurements.