Author

Christian Hundt

Nvidia (United States)ORCID 0000-0002-7995-1858Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:protein sequence· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:sequence-to-function modeling· 1

Frequent Co-Authors

Alejandro ChacóniD· 2 shared Bertil SchmidtiD· 2 shared Felix KallenborniD· 2 shared Christian DallagoiD· 1 shared Hassan SirelkhatimiD· 1 shared Kieran DidiiD· 1 shared Martin SteineggeriD· 1 shared Milot MirditaiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 36 mutual co-author links

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2 shared papersBioinformatics

Alejandro ChacónORCID

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2 papers

Recent·Most cited

GPU-accelerated homology search with MMseqs2

Felix Kallenborn, Alejandro Chacón, Christian Hundt, Hassan Sirelkhatim, Kieran Didi, Sooyoung Cha, Christian Dallago, Milot Mirdita, Bertil Schmidt, Martin Steinegger

The paper introduces GPU-accelerated homology search with MMseqs2, achieving faster sequence similarity detection than CPU methods and improving structure prediction speeds.

Nature Methods · Sep 18, 2025Peer-reviewedBioinformatics

CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search

Bertil Schmidt, Felix Kallenborn, Alejandro Chacón, Christian Hundt

CUDASW++4.0 improves protein sequence database search speed using GPU-based Smith-Waterman alignment with performance gains over previous methods and CPU tools.

BMC Bioinformatics · Nov 2, 2024Peer-reviewedBioinformatics