Author

Emmanuel Bergot

Centre Hospitalier Universitaire de Caen NormandieORCID 0000-0002-8097-8820Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:scRNA-seq· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

A. JustetiD· 1 shared Adam SzmuliD· 1 shared Antje PrasseiD· 1 shared Aurélie CazesiD· 1 shared Aurélien DinhiD· 1 shared Bart M. VanaudenaerdeiD· 1 shared Benjamin SeeligeriD· 1 shared Bruno CrestaniiD· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperCell Biology

A. JustetORCID

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2 papers

Recent·Most cited

The pleuroparenchymal fibroelastosis atlas reveals aberrant cell states and their zonation as an alternate roadmap to lung fibrosis

Jannik Ruwisch, Aurélie Cazes, Lena Maureen Leiber, Raphaël Borie, Lavinia Neubert, C Leonard, Vincent de Montpréville, Adam Szmul, Farah Moussa, Stijn E. Verleden, Svenja Gaedcke, Jan Hegermann, Jan Fuge, Matthias Ballmaier, Jan C. Kamp, , Jonas C. Schupp

This paper presents the first single-nucleus RNA sequencing atlas of pleuroparenchymal fibroelastosis, identifying novel cell states and their spatial organization in lung fibrosis.

Science Advances · May 8, 2026Peer-reviewedCell Biology

Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells

John Blischak, Ludovic Tailleux, Marsha Myrthil, Cécile Charlois-Ou, Emmanuel Bergot, Aurélien Dinh, Gloria Morizot, Olivia Chény, Cassandre Von Platen, Jean‐Louis Herrmann, Roland Brosch, Luis Bruno Barreiro, Yoav Gilad

The paper uses gene expression in dendritic cells to predict tuberculosis susceptibility, finding differentially expressed genes and genetic polymorphisms associated with TB risk.

Scientific Reports · Jul 12, 2017Peer-reviewedGenomics