Author

Sammy Ferri Borgogno

The University of Texas MD Anderson Cancer CenterORCID 0000-0002-8270-8963Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:spatial transcriptomics· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1

Frequent Co-Authors

Akshay BasiiD· 1 shared Andres Ernesto QuesadaiD· 1 shared Anna Pamela CalinawaniD· 1 shared Branko CuglievaniD· 1 shared Carlos Bueso-RamosiD· 1 shared Christopher D. PachecoiD· 1 shared Christopher P. LyiD· 1 shared Enes DasdemiriD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperCancer Biology

Akshay BasiORCID

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2 papers

Recent·Most cited

Multimodal Spatial Proteomic Profiling in Acute Myeloid Leukemia

Christopher P. Ly, Ivo Veletić, Christopher D. Pacheco, Enes Dasdemir, Fatima Zahra Jelloul, Sammy Ferri Borgogno, Akshay Basi, Javier A. Gomez, Jessica Lynn Root, Patrick Kevin Reville, Sonali Jindal, Sreyashi Basu, Padmanee Sharma, Andres Ernesto Quesada, Carlos Bueso-Ramos, , Hussein A. Abbas

This study uses high-plex spatial proteomics to identify tertiary lymphoid-like structures in AML bone marrow and links them to patient outcomes.

npj Precision Oncology · May 20, 2025Peer-reviewedCancer Biology

Learning directed acyclic graphs for ligands and receptors based on spatially resolved transcriptomic analysis of ovarian cancer

Shrabanti Chowdhury, Sammy Ferri Borgogno, Anna Pamela Calinawan, Yang Peng, Wenyi Wang, Jie Peng, Samuel C. Mok, Pei Wang

This paper introduces LRnetST, a statistical method for inferring ligand-receptor interaction networks from spatial transcriptomic data of ovarian tumors, revealing common and distinct interactions across samples.

bioRxiv · Aug 3, 2021 · PreprintSystems Biology