Author

Oliver Bodeit

Humboldt-Universität zu BerlinORCID 0000-0002-8474-2006Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:metabolomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Research Focus:software / tool· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Anne GoelzeriD· 1 shared Chalermroj SutthaphiromiD· 1 shared Edda KlippiD· 1 shared Emirhan Cenk Ulas· 1 shared Inès Ben Samir· 1 shared Jonathan R. KarriD· 1 shared Pimchai ChaiyeniD· 1 shared Rune LindingiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 16 mutual co-author links

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1 shared paperSystems Biology

Anne GoelzerORCID

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2 papers

Recent·Most cited

Thermodynamically Explicit Kinetics with Potential for Genome-wide Application

Oliver Bodeit, Chalermroj Sutthaphirom, Emirhan Cenk Ulas, Rune Linding, Pimchai Chaiyen, Edda Klipp

This paper introduces a Thermodynamically Explicit kinetic framework for dynamic metabolic modeling, validated on glycolysis, offering a scalable tool for genome-wide applications.

bioRxiv · Mar 2, 2025 · PreprintBiophysics

RBAtools: a programming interface for Resource Balance Analysis modelling

Oliver Bodeit, Inès Ben Samir, Jonathan R. Karr, Anne Goelzer, Wolfram Liebermeister

RBAtools provides a programming API for Resource Balance Analysis, enabling custom workflows and model manipulation for non-expert users.

Bioinformatics Advances · Jan 1, 2023Peer-reviewedSystems Biology