Author

Soumilee Chaudhuri

Indiana UniversityORCID 0000-0002-8488-6114Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:contrastive learning· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Andrew J. SaykiniD· 2 shared Kwangsik T. NhoiD· 2 shared Shiwei LiuiD· 2 shared David A. Bennett· 1 shared David Alan BennettiD· 1 shared Dongjun ChungiD· 1 shared Fatemeh Sadat Fatemi Nasrollahi· 1 shared Filipi N. SilvaiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Andrew J. SaykinORCID

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2 papers

Recent·Most cited

Genetic & Genomic MedicinemedRxivPreprintJan 8, 2025

Multi-Omics Analysis for Identifying Cell-Type-Specific Druggable Targets in Alzheimer's Disease

Shiwei Liu, Minyoung Cho, Yen-Ning Huang…·Kwangsik T. Nho

This study identifies cell-type-specific druggable targets in Alzheimer's disease by integrating GWAS and eQTL data across multiple cell types and datasets.

1 citation

humanGWAS summary statistics

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BioinformaticsbioRxivPreprintDec 4, 2024

Cell Type Differentiation Using Network Clustering Algorithms

Fatemeh Sadat Fatemi Nasrollahi, Filipi N. Silva, Shiwei Liu…·Santo Fortunato

This study compares clustering algorithms for cell type annotation in scRNA-seq data, finding that Infomap outperforms others in identifying cell types in PBMC and ROSMAP datasets.

2 citations

humanscRNA-seq

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