Author

Emmanouil A. Markakis

Hellenic Mediterranean UniversityORCID 0000-0002-8791-0669Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 3 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 2 Research Focus:host-pathogen & immune response· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:comparative / phylogenetic analysis· 1

Frequent Co-Authors

Nikolaos ArapitsasiD· 3 shared Panagiotis F. SarrisiD· 3 shared Savvas ParagkamianiD· 3 shared Stefanos K. SoultatosiD· 3 shared Christos A. ChristakisiD· 2 shared Vassiliki A. MichalopoulouiD· 2 shared Alexandros StamatakisiD· 1 shared Christos PennosiD· 1 shared

Activity by Year

2021-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersMicrobiology

Nikolaos ArapitsasORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

MicrobiologybioRxivPreprintJul 21, 2026

Halophytic endophytes provide transferable immune functions for crop resilience

Vassiliki A. Michalopoulou, Stefanos K. Soultatos, Savvas Paragkamian…·Panagiotis F. Sarris

This study shows halophytic endophytes like Kushneria enhance crop immunity against pathogens through host immune responses and a novel RNA-NLR axis, without direct antagonism.

1 citation

plant (other)multiome

MicrobiologybioRxivPreprintJun 15, 2026

A Thousand Meters Deep: Vertical Profiling of the Subterranean Microbes of Gourgouthakas Cave

Savvas Paragkamian, Christos A. Christakis, Vassiliki A. Michalopoulou…·Panagiotis F. Sarris

This study explores the microbiology of Gourgouthakas Cave, identifying diverse microbes and their potential as biocontrol agents against agricultural pathogens.

DOI 10.64898/2026.03.19.712943

metagenomicsexperimental assay

MicrobiologybioRxivPreprintFeb 6, 2026

Unravelling the genomic and functional arsenal of Bacilli endophytes from plants with different lifestyles

Nikolaos Arapitsas, Christos A. Christakis, Savvas Paragkamian…·Panagiotis F. Sarris

This study identifies novel Bacilli endophytes from plants with different lifestyles, revealing extensive biosynthetic potential and functional diversity.

DOI 10.64898/2026.02.06.704400

plant (other)whole-genome sequencing

GeneticsJournal of FungiPeer-reviewedSep 9, 2021

The NADPH Oxidase A of Verticillium dahliae is Essential for Pathogenicity, Normal Development, and Stress Tolerance, and it Interacts with Yap1 to Regulate Redox Homeostasis

Vasileios Vangalis, Ioannis A. Papaioannou, Emmanouil A. Markakis…·Milton A. Typas

This study investigates the roles of NoxA and Yap1 in redox homeostasis and pathogenicity of Verticillium dahliae, showing their essential functions in development, stress tolerance, and antioxidant gene regulation.

14 citations

fungi (other)experimental assay