Author

Tom Walsh

University of WashingtonORCID 0000-0002-8875-0310Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

Amal Abu RayyaniD· 1 shared Amihood Singer· 1 shared Amir PelegiD· 1 shared André LieberiD· 1 shared Andrew B. StergachisiD· 1 shared Asgeir Orn ArnthorssoniD· 1 shared Bella DavidoviD· 1 shared Benjamin J. MalloryiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenetics

Amal Abu RayyanORCID

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2 papers

Recent·Most cited

Resolving the chromatin impact of mosaic variants with targeted Fiber-seq

Stephanie C. Bohaczuk, Zachary J. Amador, Chang Long Li, Benjamin J. Mallory, Elliott G. Swanson, Jane Ranchalis, Mitchell Robert Vollger, Katherine M. Munson, Tom Walsh, Morgan O. Hamm, Yizi Mao, André Lieber, Andrew B. Stergachis

This study uses targeted Fiber-seq to analyze the chromatin impact of mosaic variants, showing that pathogenic DMPK CTG expansions disrupt regulatory elements and that base editing can alter chromatin accessibility.

bioRxiv · Jul 9, 2024 · PreprintGenomics

Spectrum of genes for inherited hearing loss in the Israeli Jewish population, including the novel human deafness gene ATOH1

Zippora Brownstein, Süleyman Gülsüner, Tom Walsh, Fábio Tadeu Arrojo Martins, Shahar Taiber, Ofer Isakov, Ming K. Lee, Mor Bordeynik‐Cohen, Maria Birkan, Weise Chang, Silvia Casadei, Nada Danial‐Farran, Amal Abu Rayyan, Ryan J. Carlson, Lara Kamal, , Karen B. Avraham

The paper identifies genetic causes of inherited hearing loss in the Israeli Jewish population, finding a novel deafness gene ATOH1 and demonstrating the effectiveness of targeted genomic sequencing.

Clinical Genetics · Jul 20, 2020Peer-reviewedGenetics