Author

Daniel Z. Doyle

University of MichiganORCID 0000-0002-8959-5906Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:mouse· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Assay:ChIP-seq· 1 Organism:human· 1

Frequent Co-Authors

Kenneth Y. KwaniD· 2 shared Mandy M. S. LamiD· 2 shared Owen H. FunkiD· 2 shared Yaman QaliehiD· 2 shared Adel QaliehiD· 1 shared Akemi ShibataiD· 1 shared Alex FornitoiD· 1 shared Alice SoreliD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersNeuroscience

Kenneth Y. KwanORCID

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Author profile →

3 papers

Recent·Most cited

Competing Programs Shape Cortical Sensorimotor-Association Axis Development

Jeremiah Tsyporin, Menglei Zhang, Cai Qi, Ashlea Segal, Xinyun Li, Hyo‐Jin Kim, Sang-Hun Choi, Ivan Pavlović, Sara Bandiera, Thomas S. Finn, Suel–Kee Kim, Akemi Shibata, Takumi Nakamura, Kohei Onishi, Ziqin Zhang, , Nenad Šestan

The paper presents the MIND model, showing that competing induction and exclusion programs shape the sensorimotor-to-association axis in the neocortex across species.

Nature · Jul 1, 2026Peer-reviewedNeuroscience

Postmitotic accumulation of histone variant H3.3 in new cortical neurons establishes neuronal chromatin, transcriptome, and identity

Owen H. Funk, Yaman Qalieh, Daniel Z. Doyle, Mandy M. S. Lam, Kenneth Y. Kwan

This study shows that de novo accumulation of H3.3 in postmitotic neurons is essential for establishing neuronal chromatin, transcriptome, and identity, distinct from its role in long-term histone maintenance.

Proceedings of the National Academy of Sciences · Aug 5, 2022Peer-reviewedNeuroscience

Chromatin remodeler Arid1a regulates subplate neuron identity and wiring of cortical connectivity

Daniel Z. Doyle, Mandy M. S. Lam, Adel Qalieh, Yaman Qalieh, Alice Sorel, Owen H. Funk, Kenneth Y. Kwan

This study shows that Arid1a is essential for subplate neuron function and cortical connectivity, with its loss causing axon miswiring and corpus callosum agenesis.

Proceedings of the National Academy of Sciences · May 19, 2021Peer-reviewedNeuroscience