Author

Xiaoyun Zhang

Microsoft (United States)ORCID 0000-0002-8994-1012Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Xiaoyun Zhang1 paper · Guangxi University of Chinese Medicine

Biology Disciplines

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Bioinformatics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Assay:metabolomics· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Luyu Yang· 2 shared Chen ZhangiD· 1 shared Chi‐chung HuiiD· 1 shared Hu-Liang Jia· 1 shared Hu-Liang Jiang· 1 shared Hua-Jie Zong· 1 shared Jing XuiD· 1 shared Jing XuiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersBioinformatics

Luyu Yang

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Author profile →

3 papers

Recent·Most cited

Spatial multi omics enables single cell transcriptome metabolome inference

Luyu Yang, Jing Xu, Tian-lun Wang, Zhu Qi-ning, Xiaoyun Zhang, Lun–Xiu Qin, Hua-Jie Zong, Hu-Liang Jia, Xueting Shen

CHIMERA infers single cell metabolomes from scRNA-seq data using spatially paired multi-omics data, revealing metabolic reprogramming and subclusters in liver disease models.

bioRxiv · Aug 12, 2026 · PreprintBioinformatics

haCCA: Multi-module Integrating of spatial transcriptomes and metabolomes.

Xiaotian Shen, Jing Xu, Chen Zhang, Xiaoyun Zhang, Zhouqing Chen, Hu-Liang Jiang, Luyu Yang

haCCA integrates spatial transcriptomes and metabolomes to explore metabolic alterations in ICC, finding NETs upregulate Scd1 to activate fatty acid metabolism.

bioRxiv · Aug 20, 2024 · PreprintBioinformatics

Irx1 and Irx2 play dose-dependent cooperative functions in mammalian development

Sepideh Sheybani-Deloui, Leo Xu, Lijuan Hu, Qiongjing Yuan, Joe Eun Son, Kyoung-Han Kim, Weifan Liu, Rong Mo, Xiaoyun Zhang, Lijun Chi, Paul Delgado-Olguı́n, Chi‐chung Hui

This study investigates the dose-dependent cooperative roles of Irx1 and Irx2 in mouse development, revealing distinct phenotypic outcomes from their genetic ablation.

bioRxiv · Oct 3, 2022 · PreprintDevelopmental Biology