Author

Juliana Gil

University of California, DavisORCID 0000-0002-9042-7459Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:genome assembly· 2 Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1 Assay:metagenomics· 1 Organism:mouse· 1 Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1

Frequent Co-Authors

Keri Cavanaugh· 2 shared Kyle FletcheriD· 2 shared Richard W. MichelmoreiD· 2 shared Angkana T. HuangiD· 1 shared Anucha MuenthaisongiD· 1 shared Aubrey Kenefick· 1 shared Cayla Tsuchida· 1 shared Joan Wong· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersGenetics

Keri Cavanaugh

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3 papers

Recent·Most cited

Targeted metagenomic sequencing with spiked primers for enrichment of viruses in wastewater for pathogen surveillance

Matt C Parker, Nisachon Apinda, Siriwat Uamngamsup, Polawat Phetra, Terdsak Yano, Kanokwan Sangkakam, Thanaporn Eiamsam-ang, Anucha Muenthaisong, Pune Phetra, Angkana T. Huang, Mark Smolinski, Sarah H. Olson, Nathan D. Grubaugh, Maíra Phelps, Karyna Rosario, , Patipat Susumpow

The paper develops MSSPE, a method to enrich low-abundance viruses in wastewater using spiked primers, improving detection in resource-limited settings.

bioRxiv · Dec 26, 2025 · PreprintGenomics

AFLAP: Assembly-Free Linkage Analysis Pipeline using k-mers from whole genome sequencing data

Kyle Fletcher, Lin Zhang, Juliana Gil, Rongkui Han, Keri Cavanaugh, Richard W. Michelmore

AFLAP constructs high-density genetic maps and improves genome assemblies using k-mers from whole genome sequencing data without requiring a reference genome.

Genome biology · Apr 21, 2021Peer-reviewedGenetics

Genomic signatures of somatic hybrid vigor due to heterokaryosis in the oomycete pathogen, Bremia lactucae.

Kyle Fletcher, Juliana Gil, Lien D. Bertier, Aubrey Kenefick, Kelsey J. Wood, Lin Zhang, Sebastian Reyes-Chin-Wo, Keri Cavanaugh, Cayla Tsuchida, Joan Wong, Richard W. Michelmore

The paper reports a high-quality genome assembly of Bremia lactucae and identifies heterokaryosis as a source of somatic hybrid vigor in this oomycete pathogen.

Nature Communications · Jun 14, 2019Peer-reviewedGenomics