Author

Anthony N. Federico

Boston UniversityORCID 0000-0002-9200-1689Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Stefano MontiiD· 3 shared Dileep KishoreiD· 1 shared Joseph G. KerniD· 1 shared Joshua David CampbelliD· 1 shared Kritika Karri· 1 shared Tanya T. KaragiannisiD· 1 shared Xaralabos VarelasiD· 1 shared Yusuke KogaiD· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 18 mutual co-author links

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3 shared papersBioinformatics

Stefano MontiORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Structure Learning for Hierarchical Regulatory Networks

Anthony N. Federico, Joseph G. Kern, Xaralabos Varelas, Stefano Monti

SHINE improves network structure learning from high-dimensional data with limited samples by leveraging shared structural information across multiple networks.

bioRxiv · May 27, 2021 · PreprintBioinformatics

hypeR: An R Package for Geneset Enrichment Workflows

Anthony N. Federico, Stefano Monti

hypeR provides an R package for geneset enrichment workflows with flexible analysis, visualization, and reporting features.

Bioinformatics · Sep 5, 2019Peer-reviewedBioinformatics

Pipeliner: A Nextflow-based framework for the definition of sequencing data processing pipelines

Anthony N. Federico, Tanya T. Karagiannis, Kritika Karri, Dileep Kishore, Yusuke Koga, Joshua David Campbell, Stefano Monti

Pipeliner provides a Nextflow-based framework for creating flexible and reproducible sequencing data processing pipelines, supporting bulk RNA-seq, scRNA-seq, and DGE data.

Frontiers in Genetics · Jun 28, 2019Peer-reviewedBioinformatics