Tanya T. Karagiannis

This study identifies age and survival-related transcriptomic signatures in longevity-enriched cohorts using RNAseq data from blood samples.

This study analyzes multi-omic data from canine osteosarcoma to identify inter-patient heterogeneity and immune enrichment in metastatic lesions.

This study compares two metagenomic classifiers, finds classifier-specific results, and recommends integrating multiple classifiers to better capture age-associated taxa.

This paper introduces a Bayesian multinomial regression method for analyzing cell type proportions without requiring a reference cell type, using the rjags package in R.

This study uses scRNA-seq to show chronic opioid use suppresses antiviral gene programs in immune cells, both acutely and chronically, highlighting potential immune system harm.

Pipeliner provides a Nextflow-based framework for creating flexible and reproducible sequencing data processing pipelines, supporting bulk RNA-seq, scRNA-seq, and DGE data.