Author

Jack M. Colicchio

University of California, BerkeleyORCID 0000-0002-9297-7403Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:Arabidopsis· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Organism:plant (other)· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Amy BriffaiD· 1 shared Benjamin K. BlackmaniD· 1 shared Daniel ZilbermaniD· 1 shared David B. LyonsiD· 1 shared Elizabeth HollweyiD· 1 shared Ian Anderson· 1 shared Jaemyung ChoiiD· 1 shared James H. ThorneiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenetics

Amy BriffaORCID

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2 papers

Recent·Most cited

Regional gene-environment association models improve insights into agents and targets of selection by climate in Mimulus guttatus

Ren N Hamm, Michelle A. Stern, Ryan M. Boynton, Jack M. Colicchio, Victor Canta-Gallo, Jason P. Sexton, James H. Thorne, Nicholas J. Kooyers, Benjamin K. Blackman

This study shows that regional gene-environment association models provide more informative insights into climate adaptation agents and targets than range-wide models in Mimulus guttatus.

bioRxiv · Oct 1, 2026 · PreprintEvolutionary Biology

Extensive de novo activity stabilizes epigenetic inheritance of CG methylation in Arabidopsis transposons

David B. Lyons, Amy Briffa, Shengbo He, Jaemyung Choi, Elizabeth Hollwey, Jack M. Colicchio, Ian Anderson, Xiaoqi Feng, Martin Howard, Daniel Zilberman

The paper shows that de novo methylation stabilizes epigenetic inheritance of CG methylation in Arabidopsis transposons, counteracting maintenance failure.

Cell Reports · Feb 22, 2023Peer-reviewedGenetics