Author

Yanqing Zhou

ORCID 0000-0002-9319-2579Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Approach:experimental assay· 2 Research Focus:software / tool· 2 Research Focus:variant calling· 2 Research Focus:variant effect prediction· 2 Assay:whole-exome sequencing· 2 Approach:benchmark study· 1 Organism:human· 1

Frequent Co-Authors

Shifu CheniD· 3 shared Yaru CheniD· 3 shared Jia GuiD· 2 shared Ao Shen· 1 shared Jian Ren· 1 shared Jie LiuiD· 1 shared Qi ZhaoiD· 1 shared Shuhan ZhaoiD· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersBioinformatics

Shifu ChenORCID

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3 papers

Recent·Most cited

CaMutQC: An R Package for Integrative Quality Control of Cancer Somatic Mutations

Xin Wang, Teng‐Jia Jiang, Ao Shen, Yaru Chen, Yanqing Zhou, Jie Liu, Shuhan Zhao, Shifu Chen, Jian Ren, Qi Zhao

CaMutQC is an R package that performs quality control and filtering of cancer somatic mutations, improving accuracy and comparability across studies.

bioRxiv · Aug 12, 2024 · PreprintBioinformatics

gencore: an efficient tool to generate consensus reads for error suppressing and duplicate removing of NGS data

Shifu Chen, Yanqing Zhou, Yaru Chen, Tanxiao Huang, Wenting Liao, Yun Xu, Zhicheng Li, Jia Gu

gencore removes duplicates and suppresses sequencing errors in NGS data, handling UMIs and generating detailed reports for quality control.

BMC Bioinformatics · Dec 1, 2019Peer-reviewedBioinformatics

fastp: an ultra-fast all-in-one FASTQ preprocessor

Shifu Chen, Yanqing Zhou, Yaru Chen, Jia Gu

fastp unifies FASTQ quality control, adapter trimming, filtering, and base correction in one scan; single-threaded, it ran 2–5 times faster than FASTQC, Cutadapt, or Trimmomatic.

Bioinformatics · Jul 7, 2018Peer-reviewedBioinformatics✦ In-depth digest