Author

Kevin G. Johnston

University of California, IrvineORCID 0000-0002-9381-9212Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Xiangmin XuiD· 2 shared Honglei ReniD· 1 shared John F. Guzowski· 1 shared Qing Hua NieiD· 1 shared Qing Nie· 1 shared Rachel Crary· 1 shared Steven F. GriecoiD· 1 shared Suoqin JiniD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Xiangmin XuORCID

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2 papers

Recent·Most cited

Inferring neuron-neuron communications from single-cell transcriptomics through NeuronChat

Wei Zhao, Kevin G. Johnston, Honglei Ren, Xiangmin Xu, Qing Hua Nie

The paper introduces NeuronChat, a tool for inferring neuron-neuron communication networks from single-cell transcriptomics data, validated on human and mouse datasets and applied to autism spectrum disorder.

Nature Communications · Feb 28, 2023Peer-reviewedBioinformatics

Robust Population Single Neuronal Calcium Signal Extraction Using SCOUT Allows for Longitudinal Analysis of Behavior-associated Neural Ensemble Dynamics

Kevin G. Johnston, Steven F. Grieco, Zhaoxia Yu, Suoqin Jin, Tong Shen, Rachel Crary, John F. Guzowski, Todd C. Holmes, Qing Nie, Xiangmin Xu

SCOUT improves neuronal tracking in longitudinal calcium imaging by reducing motion artifacts and false discoveries, enabling analysis of neural ensemble dynamics over 60 days.

bioRxiv · Aug 26, 2020 · PreprintNeuroscience