Zhen Chen

PCfun annotates protein complex function using natural language processing and machine learning, integrating word embeddings from PubMed Central articles with supervised and unsupervised methods.

This study develops DeepCSO, a deep-learning tool for predicting Cysteine S-sulphenylation sites across species, showing improved performance over existing methods.

The paper introduces DeepKhib, a deep-learning framework for predicting lysine 2-hydroxyisobutyrylation sites, showing improved performance over existing methods across multiple species.

MMS2plot is an R package that visualizes MS/MS spectra for modified and non-modified peptides to aid in PTM assignment.