Author

Graça S. Marques

Universidade Nova de LisboaORCID 0000-0002-9431-3539Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 2 Organism:Drosophila· 2 Assay:scRNA-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Catarina C. F. HomemiD· 2 shared José Teles-ReisiD· 1 shared Nikolaos KonstantinidesiD· 1 shared Patrícia H. BritoiD· 1 shared Ricardo F. dos SantosiD· 1 shared Tiago BaptistaiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 9 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Catarina C. F. HomemORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GenomicsNAR Genomics and BioinformaticsPeer-reviewedDec 11, 2025

FLYNC: A Machine Learning-Driven Framework for Discovering Long Non-Coding RNAs in Drosophila melanogaster

Ricardo F. dos Santos, Tiago Baptista, Graça S. Marques, Catarina C. F. Homem

FLYNC predicts long non-coding RNAs in Drosophila using machine learning, identifying novel tissue-specific lncRNAs and validating some via qPCR.

DOI 10.1093/nargab/lqaf216

Drosophilabulk RNA-seq

𝕏 PostBluesky

NeurosciencebioRxivPreprintJun 22, 2021

Fate transitions in Drosophila neural lineages: a single cell road map to mature neurons.

Graça S. Marques, José Teles-Reis, Nikolaos Konstantinides…·Catarina C. F. Homem

This study uses single-cell RNA sequencing and genetic strategies to analyze neuron maturation in Drosophila, showing that maturation begins post-neuron birth through transcriptional changes coordinated with developmental stage.

DOI 10.1101/2021.06.22.449317

DrosophilascRNA-seq

𝕏 PostBluesky