Author

Rafael Aldabe

Centro de Investigación Médica AplicadaORCID 0000-0002-9461-020XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioengineering· 1 Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:mouse· 3 Research Focus:cell type annotation· 2 Assay:imaging· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Approach:microscopy & imaging analysis· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Arrate Muñoz‐BarrutiaiD· 2 shared Pablo Delgado-RodrigueziD· 2 shared Andrew Garcia· 1 shared Daniel Shi· 1 shared David Bolton· 1 shared Elaine J. Marchi· 1 shared Fatima Inusa· 1 shared Gholson J. LyoniD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioengineering

Arrate Muñoz‐BarrutiaORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

In-depth 3D Exploration of Autosomal Dominant Polycystic Kidney Disease Through Light Sheet Fluorescence Microscopy

Pablo Delgado-Rodriguez, Itsaso Vitoria, Gonzalo Ricardo Ríos-Muñoz, Lídia Bardia, Nicolás Lamanna‐Rama, Laura Nicolás-Sáenz, Jon Sporring A, María Luisa Soto‐Montenegro, Rafael Aldabe, Julien Colombelli, Arrate Muñoz‐Barrutia

This study uses Light Sheet Fluorescence Microscopy to analyze 3D kidney morphology in ADPKD mouse models, identifying biomarkers of tissue deformation.

Scientific Reports · Nov 19, 2025Peer-reviewedBioengineering

SAM-based Automatic Workflow for Histology Cyst Segmentation in Autosomal Dominant Polycystic Kidney Disease

Pablo Delgado-Rodriguez, Roman Kinakh, Rafael Aldabe, Arrate Muñoz‐Barrutia

This paper introduces an automated workflow using the SAM model to segment cysts in histological images of ADPKD, showing increased diseased tissue proportion over time and outperforming existing tools.

bioRxiv · Sep 2, 2024 · PreprintBioinformatics

Evaluating possible maternal effect lethality and genetic background effects in Naa10 knockout mice

Gholson J. Lyon, Joseph Longo, Andrew Garcia, Fatima Inusa, Elaine J. Marchi, Daniel Shi, Max Johannes Dörfel, Thomas Arnesen, Rafael Aldabe, Scott K. Lyons, Melissa Nashat, David Bolton

The paper evaluates maternal effect lethality and genetic background effects in Naa10 knockout mice, finding no replication of maternal effect lethality but some embryonic lethality in specific genetic backgrounds.

PLoS ONE · May 7, 2024Peer-reviewedGenetics