Author

Jenny Kao‐Kniffin

Cornell UniversityORCID 0000-0002-9469-8088Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:imaging· 1

Frequent Co-Authors

Yejin SoniD· 2 shared April Z. GuiD· 1 shared Ayesha AwaniD· 1 shared Eric J. CraftiD· 1 shared Guangyu LiiD· 1 shared J. Alfredo Blakeley‐RuiziD· 1 shared Manuel KleineriD· 1 shared Mathew Baldwin· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Yejin SonORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 13, 2026

Metagenomics-enabled proteomics reveals how AMF and PSB co-inoculation reshapes tomato rhizosphere dynamics across growth stages

Yejin Son, Eric J. Craft, Miguel A. Piñeros…·Jenny Kao‐Kniffin

The paper investigates how co-inoculation with AMF and PSB affects tomato rhizosphere dynamics across growth stages using metagenome-informed metaproteomics.

1 citation

plant (other)metagenomics

𝕏 PostBluesky

EcologyFrontiers in MicrobiologyPeer-reviewedNov 28, 2025

Geno-pheno characterization of crop rhizospheres: An integrated Raman spectroscopy and microbiome approach in conventional and organic agriculture

Yejin Son, Ping He, Mathew Baldwin…·Jenny Kao‐Kniffin

This study compares microbial communities in conventional and organic agriculture using Raman spectroscopy and 16S rRNA sequencing, finding distinct phenotypic adaptations linked to management practices.

DOI 10.3389/fmicb.2025.1721013

metagenomicsimaging

𝕏 PostBluesky