Author

Shilpa Bhowmick

ICMR National Institute for Research on Women's HealthORCID 0000-0002-9586-3989Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:host-pathogen & immune response· 1 Organism:mouse· 1

Frequent Co-Authors

Vainav V. PateliD· 4 shared Jyoti SutariD· 3 shared Varsha Padwal· 3 shared Jayanta BhattacharyaiD· 2 shared Jayanthi S. ShastriiD· 2 shared Namrata Neman· 2 shared Prajakta Kamble· 2 shared Pratik DevadigaiD· 2 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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Focal author (center)Selected co-authorORCID co-authorUnlinked name

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4 shared papersMicrobiology

Vainav V. PatelORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Proviral dynamics and HIV-1C viral diversity in the context of HIV-TB co-infection

Shilpa Bhowmick, Sharad Bhagat, Sapna Yadav, Kartik Kadam, Prajakta Kamble, Shweta Shrivas, Pratik Devadiga, Snehal Kaginkar, Varsha Padwal, Namrata Neman, Satyajit Musale, Nandan Mohite, Vidya Sanjay Nagar, Priya Patil, Sachee R Agrawal, , Vainav V. Patel

This study examines how TB co-infection affects HIV reservoir dynamics, viral diversity, and drug resistance in ART-naive individuals.

bioRxiv · Apr 8, 2026 · PreprintMicrobiology

Distinct region-specific neutralization profiles of contemporary HIV-1 clade C against best-in-class broadly neutralizing antibodies

Jyoti Sutar, Priyanka Jayal, Ranajoy Mullick, Sangeeta Chaudhary, Prajakta Kamble, Shilpa Bhowmick, Snehal Kaginkar, Varsha Padwal, Pratik Devadiga, Namrata Neman, Dale Kitchin, Haajira Kaldine, Nonhlanhla N. Mkhize, Bongiwe Ndlovu, Kamini Gounder, , Jayanta Bhattacharya

This study compares neutralization profiles of contemporary HIV-1 clade C viruses from India and South Africa against broadly neutralizing antibodies, finding distinct resistance patterns and env signatures.

Journal of Virology · May 16, 2025Peer-reviewedImmunology

LHX2 in germ cells control tubular organization in the developing mouse testis

Neha Singh, Domdatt Singh, Anshul Bhide, Richa Sharma, Shilpa Bhowmick, Vainav V. Patel, Deepak N. Modi

This paper shows that Lhx2 in germ cells is important for testicular tubular organization in mice, affecting multiple cell types and vascular development.

Experimental Cell Research · Feb 14, 2023Peer-reviewedDevelopmental Biology

Improved HIV-1 drug resistance mutation prediction using quasispecies reconstruction supported analysis

Jyoti Sutar, Shilpa Bhowmick, Varsha Padwal, Vidya Sanjay Nagar, Priya Patil, Vainav V. Patel, Atmaram Hari Bandivdekar

This study improves HIV-1 drug resistance mutation detection using quasispecies reconstruction algorithms, showing high concordance with traditional methods for mutations above 10% frequency.

bioRxiv · May 24, 2021 · PreprintBioinformatics