Author

Michael D. Prados

University of California, San FranciscoORCID 0000-0002-9630-2075Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Michael E. BerensiD· 2 shared Sara Ann ByroniD· 2 shared Adam Cain ResnickiD· 1 shared Adam KrayaiD· 1 shared Alan Haruo BryceiD· 1 shared Aleksandar SekulićiD· 1 shared Allison P. HeathiD· 1 shared Andrew Edward SloaniD· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Michael E. BerensORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

GenomicsCell GenomicsPeer-reviewedMay 31, 2023

OpenPBTA: An Open Pediatric Brain Tumor Atlas

Joshua A. Shapiro, Krutika Satish Gaonkar, Stephanie J. Spielman…·Jaclyn Taroni

OpenPBTA provides a collaborative platform to genomically characterize 1,074 pediatric brain tumors and 22 cell lines, offering analysis modules and somatic datasets for research and clinical applications.

69 citationstop 1%

humanwhole-genome sequencing

𝕏 PostBluesky

Genetic & Genomic MedicineScience Translational MedicinePeer-reviewedJan 11, 2023

Analysis of fragment ends in plasma DNA from patients with cancer

Karan Kumar Budhraja, Bradon R. McDonald, Michelle D. Stephens…·Muhammed Murtaza

Analyzing the positioning and nucleotide sequence at fragment ends in plasma DNA may enable cancer diagnostics.

66 citationstop 2%

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsPLoS ONEPeer-reviewedDec 27, 2019

Tumor cell phenotype and heterogeneity differences in IDH1 mutant vs wild-type gliomas

Michael E. Berens, Anup Sood, Jill S. Barnholtz‐Sloan…·Fiona Ginty

This study compares tumor cell phenotype and heterogeneity differences between IDH1 mutant and wild-type gliomas using integrated multi-omics data.

39 citations

humanbulk RNA-seq

𝕏 PostBluesky